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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30307582_30310251_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30307582 - 30310251

Intron Length:

2670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

CTTCTGTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAAAAT

U12 Branch Point Sequence:

TCGAAGTGAAAT

Flanking Amino Acid:

DKVATVRNIKADSRLDGTWD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

0.2

1.2

63.9

38.5

Major PPT

76.5

0.6

76.2

37.8

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

-0.6

2.2

55.92

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040829

30262846 - 30311105

48260