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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30345289_30348576_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30345289 - 30348576

Intron Length:

3288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTAAATTG

5'SS Class:

major

3'SS Sequence:

GAAGAATTTTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGTTTTTAATG

Flanking Amino Acid:

GLCVCPCNRLSSKAYRATWG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.2

59.6

39.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

-0.2

1.7

47.7

48.4

Minor 5ss

37.4

-1.4

3.1

45.7

43.6

Minor BPS

64.2

0.31

1.4

61.75

41.5

Associated Gene:

Gene:

SNAP23

Ensembl Gene ID:

ENSAPLG00000012006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012518

30341828 - 30349121

7294