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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30366151_30367449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30366151 - 30367449

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGGTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAC

U12 Branch Point Sequence:

CTGTTATGACCA

Flanking Amino Acid:

LCHIVYSSKKEMEEHMRSML

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

74.7

0.62

1.1

65.7

Major PPT

62.9

0.29

1.1

62.5

37.6

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

-0.3

1.9

56.54

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041686

30366097 - 30377445

11349