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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30382368_30382903_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30382368 - 30382903

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCAGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TTTTCTTCAGAA

Flanking Amino Acid:

SRTEVVEQKEEISQNNFVYP

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

69.1

0.48

32.1

Major PPT

73.2

0.52

30.6

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

55.3

0.16

1.9

73.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012675

30377930 - 30393228

15299