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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30387605_30388920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30387605 - 30388920

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

GHSKTILCMKVVNDLVFSGS

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.6

1.17

0.7

96.8

6.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.1

0.48

1.2

74.8

38.8

Minor 5ss

26.9

-2.6

4.1

42.9

44.7

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012675

30377930 - 30393228

15299