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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30390397_30391763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30390397 - 30391763

Intron Length:

1367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTTCC

5'SS Class:

major

3'SS Sequence:

ATTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

ATTTCTTTTACA

Flanking Amino Acid:

IMCMTIHKSMIYTGCYDGSV

Intron Amino Acid Position:

976

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

68.5

37.5

Major BPS

68.1

0.45

73.5

28.6

Major PPT

89.6

0.89

0.7

84.2

Minor 5ss

47.1

-0.3

2.5

59.5

40.1

Minor BPS

0.72

1.5

81.53

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012675

30377930 - 30393228

15299