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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30391836_30392446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30391836 - 30392446

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

TTTTCCCTAAGT

Flanking Amino Acid:

LNLMQNYRCWWHGCSLIFGV

Intron Amino Acid Position:

1000

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

38.4

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

35.2

-1.7

40.3

45.6

Minor BPS

0.74

92.91

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012675

30377930 - 30393228

15299