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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30392594_30393171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30392594 - 30393171

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

TTTGCCTGACTT

Flanking Amino Acid:

FFTSRKGSKQDAVGHIERHA

Intron Amino Acid Position:

1049

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

36.6

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

84.4

0.77

0.8

77.4

36.9

Minor 5ss

35.1

-1.7

3.2

49.2

47.1

Minor BPS

58.8

0.35

1.9

80.5

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012675

30377930 - 30393228

15299