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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30402259_30404025_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30402259 - 30404025

Intron Length:

1767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTCTC

5'SS Class:

major

3'SS Sequence:

TGCTCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

TGTGCCCCATTT

Flanking Amino Acid:

YEMRNAVKDAGFRLNNQLYD

Intron Amino Acid Position:

745

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

69.2

41.7

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

79.4

0.66

0.8

73.3

31.7

Minor 5ss

37.8

-1.4

3.2

53.5

43.6

Minor BPS

44.2

-0.3

2.1

65.74

44.9

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047