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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30404773_30405778_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

30404773 - 30405778

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GCTTGCATCACAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

GTTACCTGAATG

Flanking Amino Acid:

SCRSMIALMDTDGSGKINFD

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

71.4

0.53

1.2

63.4

Major PPT

69.3

0.43

0.9

61.4

38.9

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

62.6

0.26

1.6

66.29

41.2

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047