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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30405844_30406350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30405844 - 30406350

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTTTT

5'SS Class:

major

3'SS Sequence:

TTATTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATCT

Flanking Amino Acid:

RNVLNNVVKKHKDLKTEGFE

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.2

83.9

30.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.4

0.84

0.8

85.9

32.9

Minor 5ss

42.1

-0.9

57.4

40.7

Minor BPS

67.8

0.64

1.5

82.83

39.1

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047