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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30409799_30410697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30409799 - 30410697

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTGTTCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGTTTTTAAAA

Flanking Amino Acid:

ENMIEADRPSKKKKGKPIIF

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.3

0.55

70.8

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

63.2

0.41

1.4

67.43

39.5

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047