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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30410735_30411375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30410735 - 30411375

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TGCTTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ATTTATTTACTT

Flanking Amino Acid:

RVFSEKRSLSEEVENMIEAD

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

66.9

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

80.7

0.69

0.8

73.5

37.1

Minor 5ss

41.8

-0.9

2.8

49.2

41.2

Minor BPS

59.5

0.38

1.8

78.91

37.7

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047