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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30411585_30412422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30411585 - 30412422

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GACATGCTAATT

Flanking Amino Acid:

GFAIYEVPKEMHGTKHHLQK

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.3

34.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

0.81

0.8

80.7

31.4

Minor 5ss

39.2

-1.2

3.4

56.9

47.4

Minor BPS

41.2

-0.5

2.2

54.75

41.1

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047