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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30412435_30413042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30412435 - 30413042

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCAGCT

5'SS Class:

major

3'SS Sequence:

GTTTCTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

CACCTAATACCT

Flanking Amino Acid:

LYTIGFAIYEVPKEMHGTKH

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

63.6

41.2

Major BPS

73.1

0.57

71.9

31.3

Major PPT

76.1

0.59

0.8

74.4

30.8

Minor 5ss

37.5

-1.4

3.6

57.4

46.7

Minor BPS

39.6

-0.7

1.9

52.11

42.2

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047