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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30414459_30415200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30414459 - 30415200

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TACTCCTTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

GCTTGTTTACTC

Flanking Amino Acid:

QVEWNGPWSDKSEEWNFINE

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

76.8

33.7

Major BPS

71.4

0.53

1.1

63.4

Major PPT

71.1

0.47

71.5

32.9

Minor 5ss

31.3

-2.1

2.7

33.6

35.4

Minor BPS

47.8

-0.1

57.91

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047