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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30415287_30415705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30415287 - 30415705

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TCTCTTTCAATT

Flanking Amino Acid:

HAYSVTAVEETTFKGEKIRL

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

70.1

0.45

0.9

71.1

33.5

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

57.6

0.32

1.5

72.72

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047