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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30419602_30420007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30419602 - 30420007

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTTTCTCATTC

Flanking Amino Acid:

WSALLEKAYAKLHGSYEALK

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

31.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

69.3

0.43

67.8

Minor 5ss

32.4

-2

3.3

39.8

Minor BPS

52.2

0.05

1.8

65.67

40.8

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047