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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30420142_30420860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30420142 - 30420860

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTCATTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTTGCCTTCATT

Flanking Amino Acid:

QNYAGIFHFQFWRYGDWVDV

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

0.62

1.1

77.2

Major PPT

75.9

0.58

0.9

73.6

36.1

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

68.9

0.68

1.8

87.41

38.9

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047