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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30420980_30421875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30420980 - 30421875

Intron Length:

896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATCT

Flanking Amino Acid:

NRTDICQGELGDCWFLAAIA

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.1

0.92

0.6

86.6

24.4

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

68.7

0.67

1.5

84.06

36.9

Associated Gene:

Gene:

CAPN3

Ensembl Gene ID:

ENSAPLG00000012454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013153

30400509 - 30427555

27047