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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30453167_30453859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30453167 - 30453859

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTAAT

U12 Branch Point Sequence:

AGCCCGCTAATG

Flanking Amino Acid:

LSKWRVPVPMGKKFFNFGKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

0.42

1.2

67.3

37.8

Major PPT

85.7

0.8

77.2

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

41.5

-0.7

2.2

44.67

41.4

Associated Gene:

Gene:

TMEM87A

Ensembl Gene ID:

ENSAPLG00000015845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016533

30453029 - 30475412

22384

ENSAPLT00000016540

30453029 - 30474498

21470