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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30453921_30457436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30453921 - 30457436

Intron Length:

3516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

GTTGTCTTATAT

Flanking Amino Acid:

LFSNTTIFLRFEGDEKACDP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

0.67

0.8

77.8

36.5

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

0.2

1.8

73.45

43.3

Associated Gene:

Gene:

TMEM87A

Ensembl Gene ID:

ENSAPLG00000015845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016540

30453029 - 30474498

21470

ENSAPLT00000016533

30453029 - 30475412

22384