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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30457535_30458511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30457535 - 30458511

Intron Length:

977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

CCAATGTAAATT

Flanking Amino Acid:

DCYNEVFNFGEEQAEYYFGT

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

0.72

78.4

31.2

Major PPT

72.1

0.5

1.1

68.6

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

40.8

-0.6

2.2

51.97

43.5

Associated Gene:

Gene:

TMEM87A

Ensembl Gene ID:

ENSAPLG00000015845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016533

30453029 - 30475412

22384

ENSAPLT00000016540

30453029 - 30474498

21470