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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30458629_30460234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30458629 - 30460234

Intron Length:

1606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGATCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTTTGATC

Flanking Amino Acid:

PNCSELFRPQIFYKEFVHPE

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

73.3

37.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.6

0.78

0.8

81.5

35.9

Minor 5ss

31.7

-2.1

3.8

46.3

Minor BPS

74.1

0.74

80.38

27.7

Associated Gene:

Gene:

TMEM87A

Ensembl Gene ID:

ENSAPLG00000015845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016540

30453029 - 30474498

21470

ENSAPLT00000016533

30453029 - 30475412

22384