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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30462230_30462977_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30462230 - 30462977

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGTCTTTTGACA

Flanking Amino Acid:

SSNVKEKLFTMTVELKGPYE

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.5

27.4

Major BPS

74.5

0.61

79.6

29.1

Major PPT

78.9

0.65

75.8

38.2

Minor 5ss

41.3

-1

3.1

56.6

Minor BPS

65.7

0.49

1.2

33.3

Associated Gene:

Gene:

TMEM87A

Ensembl Gene ID:

ENSAPLG00000015845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016540

30453029 - 30474498

21470

ENSAPLT00000016533

30453029 - 30475412

22384