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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30470813_30471167_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30470813 - 30471167

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCAGCTT

5'SS Class:

weak_major

3'SS Sequence:

TTCCCTCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TCTTCTATAACT

Flanking Amino Acid:

ILWRPSANNQRFAFSPLSEE

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

45.3

Major BPS

66.1

0.4

31.5

Major PPT

70.8

0.47

27.6

Minor 5ss

31.3

-2.1

3.6

48.1

47.5

Minor BPS

73.6

0.82

1.6

88.67

36.3

Associated Gene:

Gene:

TMEM87A

Ensembl Gene ID:

ENSAPLG00000015845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016540

30453029 - 30474498

21470

ENSAPLT00000016533

30453029 - 30475412

22384