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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30474442_30475370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30474442 - 30475370

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

ALPALLDSDEERMITHFERS

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.2

83.2

30.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

30.5

-2.2

2.5

33.7

41.5

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

TMEM87A

Ensembl Gene ID:

ENSAPLG00000015845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016533

30453029 - 30475412

22384