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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30498881_30499028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30498881 - 30499028

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAAG

5'SS Class:

major

3'SS Sequence:

TATTTTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATCCTAATT

Flanking Amino Acid:

LHHSKLDTTKAINLLPANTQ

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.6

40.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

79.6

0.67

0.9

78.2

Minor 5ss

38.4

-1.3

2.9

48.5

47.2

Minor BPS

65.8

0.57

1.7

85.15

Associated Gene:

Gene:

VPS39

Ensembl Gene ID:

ENSAPLG00000016003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016719

30479694 - 30500835

21142