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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30519636_30520730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30519636 - 30520730

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TAATCATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GTTAATGTAATC

Flanking Amino Acid:

VYLSGISGSTWCLSTLYQDP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

80.4

0.76

80.3

31.8

Major PPT

77.9

0.63

0.9

74.4

39.8

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

46.3

-0.3

2.1

60.57

38.9

Associated Gene:

Gene:

PLA2G4F

Ensembl Gene ID:

ENSAPLG00000002083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002125

30518729 - 30533638

14910