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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30520954_30521512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30520954 - 30521512

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATGTTAATA

Flanking Amino Acid:

LIVEYFLQQKEDASKLSDQQ

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

68.4

36.7

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

69.9

0.45

1.1

63.4

46.3

Minor 5ss

29.1

-2.4

3.4

37.5

47.2

Minor BPS

59.6

0.3

2.1

75.33

36.5

Associated Gene:

Gene:

PLA2G4F

Ensembl Gene ID:

ENSAPLG00000002083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002125

30518729 - 30533638

14910