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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30526099_30526404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30526099 - 30526404

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATGAA

5'SS Class:

strong_major

3'SS Sequence:

AAATGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

GTTACTTGAAAT

Flanking Amino Acid:

VNVKKFVVRKGTHLDAFPNQ

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

76.1

27.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

69.9

0.45

59.1

46.2

Minor 5ss

25.9

-2.8

30.8

43.1

Minor BPS

58.9

0.36

1.6

76.18

39.7

Associated Gene:

Gene:

PLA2G4F

Ensembl Gene ID:

ENSAPLG00000002083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002125

30518729 - 30533638

14910