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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30556046_30557239_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30556046 - 30557239

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTATGCTGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGTTAATGAATG

Flanking Amino Acid:

ELGEDLNEDEVPVVAVVTTA

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

64.9

41.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

60.3

0.23

1.1

55.3

44.4

Minor 5ss

32.7

-2

3.1

40.1

Minor BPS

48.4

-0.2

1.9

59.82

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002881

30546653 - 30569770

23118