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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30557377_30558666_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30557377 - 30558666

Intron Length:

1290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTATCATGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCATGAAAA

Flanking Amino Acid:

SYVSGLSATTWTMAKLYEDA

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.4

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

55.4

0.12

1.2

57.5

41.3

Minor 5ss

31.8

-2.1

3.1

36.7

42.5

Minor BPS

57.1

0.22

1.8

72.51

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002881

30546653 - 30569770

23118