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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30560814_30562107_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30560814 - 30562107

Intron Length:

1294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTAAGGTACTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTCTTTTCATT

Flanking Amino Acid:

IPESRICFLEDKLLIWNNHQ

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.3

28.1

Major BPS

100

1.24

0.5

100

Major PPT

58.6

0.19

1.1

54.2

44.7

Minor 5ss

40.6

-1.1

2.8

52.6

44.6

Minor BPS

53.9

0.2

1.7

73.2

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002881

30546653 - 30569770

23118