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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30564066_30566133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30564066 - 30566133

Intron Length:

2068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CTGTGTTCAACT

Flanking Amino Acid:

CDTFQKYKAPNVERSPEEME

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

77.1

0.61

0.8

75.1

35.4

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

51.7

0.13

71.43

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002881

30546653 - 30569770

23118