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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30625221_30628225_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30625221 - 30628225

Intron Length:

3005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAATTACA

5'SS Class:

major

3'SS Sequence:

TCCCTTCAGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTTCTGTCATC

Flanking Amino Acid:

YFRGWCPVLPQKFALTVDGS

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

67.6

37.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

48.3

-0.1

1.7

56.8

37.9

Minor 5ss

38.3

-1.3

2.7

49.6

40.2

Minor BPS

50.5

-0

2.3

73.34

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008470

30621909 - 30639947

18039