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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30628390_30630087_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30628390 - 30630087

Intron Length:

1698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCACCCCT

5'SS Class:

weak_major

3'SS Sequence:

CCAAGAAACCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

AGGCCAAGAAAC

Flanking Amino Acid:

PRRRLLSRVRDARLGFDLCA

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.4

49.9

46.5

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

47.6

-0.1

0.9

33.1

34.3

Minor 5ss

41.6

-0.9

55.3

42.8

Minor BPS

38.8

-0.8

1.8

44.45

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008470

30621909 - 30639947

18039