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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30637116_30638625_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30637116 - 30638625

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTCACAAAA

5'SS Class:

weak_major

3'SS Sequence:

AGTTACTTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTGCAGTTACTT

Flanking Amino Acid:

YTGGSQTLVRKQGIAFPNIE

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.4

61.6

39.1

Major BPS

0.57

73.6

28.6

Major PPT

73.9

0.54

0.9

40.5

Minor 5ss

35.5

-1.7

2.9

41.1

39.1

Minor BPS

44.1

-0.3

2.3

65.95

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008470

30621909 - 30639947

18039