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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30638779_30639708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30638779 - 30639708

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAA

U12 Branch Point Sequence:

TTTCCCCTGACA

Flanking Amino Acid:

NDTFQRCVAPGMARSAAEME

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

65.8

0.39

73.3

31.3

Major PPT

76.8

0.6

0.9

72.8

32.1

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

68.1

0.56

1.7

81.48

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008470

30621909 - 30639947

18039