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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30657840_30659530_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30657840 - 30659530

Intron Length:

1691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTACTTTTG

5'SS Class:

weak_major

3'SS Sequence:

AATGGTGTATTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTGTCAATAATG

Flanking Amino Acid:

NKIPVATERELVILNYLSSL

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.4

62.7

44.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

55.5

0.13

1.1

52.3

46.1

Minor 5ss

44.2

-0.6

56.8

41.4

Minor BPS

54.2

-0

65.62

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038918

30651691 - 30672695

21005