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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30662933_30664794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30662933 - 30664794

Intron Length:

1862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TATGCTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TATGCTTGAACA

Flanking Amino Acid:

HLERDLQDHEVPVVAVMTTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

67.8

37.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

66.5

0.37

1.1

62.1

Minor 5ss

35.9

-1.6

3.3

47.3

48.1

Minor BPS

64.6

0.46

1.5

73.38

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038918

30651691 - 30672695

21005

ENSAPLT00000038529

30662810 - 30672617

9808