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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30666272_30666761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30666272 - 30666761

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGGCA

5'SS Class:

major

3'SS Sequence:

GGTGTCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTGAATTAAAT

Flanking Amino Acid:

KDDYSLSEFKEWVEFTPYEV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

64.7

34.9

Major BPS

0.75

78.6

Major PPT

73.6

0.53

66.1

40.8

Minor 5ss

24.1

-3

3.2

30.2

42.9

Minor BPS

54.8

0.23

79.82

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038918

30651691 - 30672695

21005

ENSAPLT00000038529

30662810 - 30672617

9808