Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_30666900_30668886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30666900 - 30668886

Intron Length:

1987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGTGC

5'SS Class:

major

3'SS Sequence:

TATCACTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCTCTATCA

Flanking Amino Acid:

LPESRICFMKGLWSNVFSYN

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

62.8

38.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

67.4

0.39

39.6

Minor 5ss

31.7

-2.1

3.2

41.6

45.1

Minor BPS

0.37

1.9

79.94

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038529

30662810 - 30672617

9808