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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30670122_30670629_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30670122 - 30670629

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCATTGTTC

5'SS Class:

weak_major

3'SS Sequence:

AGTAATAGAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

GTGTCTTGGAAA

Flanking Amino Acid:

YLVTPECGIMVIYFIIISSF

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.4

44.9

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

46.1

-0.2

1.2

39.2

41.9

Minor 5ss

36.7

-1.5

4.3

49.6

47.1

Minor BPS

49.7

-0

1.6

60.73

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038529

30662810 - 30672617

9808