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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30670893_30672058_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30670893 - 30672058

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGCGATGA

5'SS Class:

major

3'SS Sequence:

AGAAGCCTCCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

CCTGTCTGAATG

Flanking Amino Acid:

LNYSSGSQTSYFLKQGIPFP

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

56.2

39.5

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

47.8

-0.1

1.1

38.3

39.4

Minor 5ss

31.3

-2.1

3.2

38.3

46.7

Minor BPS

-0.2

1.7

50.82

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038918

30651691 - 30672695

21005