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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30672_30763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30672 - 30763

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTCTCTTTTAAG

Flanking Amino Acid:

FNGPSGLFIAAGKGILRTMR

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

82.1

0.72

0.9

24.1

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

55.8

0.04

1.9

64.24

43.6

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009