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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30700182_30703395_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30700182 - 30703395

Intron Length:

3214

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTCCCCAG

5'SS Class:

weak_major

3'SS Sequence:

GCACTGTAGAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

ATTGCATAACCC

Flanking Amino Acid:

QWTCRFSTETVFGLNPKIGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.4

38.2

46.8

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

43.2

-0.3

1.7

41.6

42.1

Minor 5ss

27.7

-2.6

46.2

Minor BPS

45.2

-0.3

2.2

61.52

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048186

30700139 - 30713031

12893