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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30704610_30705154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30704610 - 30705154

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAG

U12 Branch Point Sequence:

CTCCTTTTAGTT

Flanking Amino Acid:

TYISGLSGTTWTMANLYRDA

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

74.1

Major BPS

60.2

0.25

1.6

61.1

45.5

Major PPT

79.9

0.67

0.9

72.8

42.2

Minor 5ss

32.7

-2

3.1

37.9

40.9

Minor BPS

49.8

0.06

1.5

63.97

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048186

30700139 - 30713031

12893