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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30705889_30706813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30705889 - 30706813

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

TGTGGCTGTATT

Flanking Amino Acid:

RDNYSTQDFKEWVEFTPYEV

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

69.8

0.45

43.3

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

44.1

-0.3

2.2

65.18

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048186

30700139 - 30713031

12893