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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30710725_30712019_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30710725 - 30712019

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTTATACTA

5'SS Class:

weak_major

3'SS Sequence:

CTCTAGTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATGCTGATCA

Flanking Amino Acid:

QREVDVIIYLNKACKYYSEQ

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.2

59.4

39.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.7

0.47

0.9

61.8

39.7

Minor 5ss

33.7

-1.9

3.1

41.7

38.4

Minor BPS

47.7

-0.1

2.1

62.64

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048186

30700139 - 30713031

12893